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Job 78898 [BobuA.17726.a.A1] [2017-11-03] [c-67-170-38-184.hsd1.wa.x.x] [Structure] [Complete]

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

Click the icons below each image to download the prediction in PDB format ( PDB file )

Images were produced using MolScript and Raster3D!



Features and Secondary Structure  
 
1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    . 
 
MISGLNPTLRLFKDHKILYSNMERGLKPLLEVDNFINKYIQNKEGLEIYDKVVGKAAAVIIYNIGLQNVQAGVVSQPAKDFLESRGIKVAYKKLVEKINDRAESLIESLENPEEVYKYMIKRGIIVNNL
tmhmm (0)
---------------------------------------------------------------------------------------------------------------------------------
low complexity (0%)
---------------------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
---------------------------------------------------------------------------------------------------------------------------------
disordered (5%)
XXXXX---------------------------------------------------------------------------------------------------------------------------X
psipred
-------EEEEEE--EEEEEE-----HHHHHHHHHHHH-HHHH---EEEEEHHHHHHHHHHHH--EEEEEHHHHHHHHHHHHHH----EEE-EE-----------------HHHHHHHHHHH-------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    21	    0.106
  max. Y    14	    0.126
  max. S    10	    0.207
  mean S     1-13   0.151
       D     1-13   0.136    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.136 D-cutoff=0.450 Networks=SignalP-TM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-129     alignment     1vk9A_201     1-147   0.8204   UNKNOWN FUNCTION


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
747491Borrelia burgdorferi CA81 (0.46%)3E-311-1291-129140100129ref|NP_212563.1|hypothetical protein BB_0429 [Borrelia burgdorferi B31] ref|...
498741Borrelia sp. SV11 (0.46%)1E-311-1291-12914199129ref|WP_008882668.1|hypothetical protein [Borrelia sp. SV1] gb|EEH00722.1| conse...
476212Borrelia burgdorferi 94a1 (0.46%)5E-311-1291-12913999129ref|WP_002661471.1|hypothetical protein [Borrelia burgdorferi] gb|EEH00169.1| c...
521010Borrelia bissettii DN1271 (0.46%)8E-311-1291-12913899129ref|YP_004777669.1|hypothetical protein BbiDN127_0432 [Borrelia bissettii DN127...
390236Borrelia afzelii PKo1 (0.46%)5E-311-1291-12913998129ref|YP_709874.1|hypothetical protein BAPKO_0451 [Borrelia afzelii PKo] ref|Y...
498742Borrelia spielmanii A14S1 (0.46%)6E-311-1291-12913998129ref|WP_006433995.1|hypothetical protein [Borrelia spielmanii] gb|EEF84372.1| co...
1234596Borrelia garinii NMJW11 (0.46%)2E-301-1291-12913798129ref|YP_072872.1|hypothetical protein BG0437 [Borrelia garinii PBi] ref|YP_00...
1239934Borrelia afzelii HLJ011 (0.46%)6E-311-1291-12913997129ref|YP_006931603.1|hypothetical protein BafHLJ01_0469 [Borrelia afzelii HLJ01] ...
412418Borrelia recurrentis A11 (0.46%)2E-311-1291-12914090129ref|YP_002222889.1|hypothetical protein BRE_431 [Borrelia recurrentis A1] ref|W...
314724Borrelia turicatae 91E1351 (0.46%)1E-301-1284-13113790128ref|YP_945427.1|hypothetical protein BT0429 [Borrelia turicatae 91E135] ref|...
140Borrelia hermsii1 (0.46%)5E-301-1291-12913690129ref|YP_001883858.1|hypothetical protein BH0429 [Borrelia hermsii HS1] ref|WP_01...
1293576Borrelia hermsii YOR1 (0.46%)7E-301-1293-13113590129gb|AHH13928.1|Hypothetical protein BHW_0072400 [Borrelia hermsii MTW] gb|A...
1155096Borrelia crocidurae str. Achema1 (0.46%)2E-311-1291-12914189129ref|YP_002222078.1|hypothetical protein BDU_427 [Borrelia duttonii Ly] ref|YP_0...
38876Borrelia lonestari1 (0.46%)5E-301-1281-12813686128gb|ABP88210.1|hypothetical protein [Borrelia lonestari]
1302858Borrelia miyamotoi LB-20011 (0.46%)5E-301-1281-12813686128ref|YP_008415576.1|hypothetical protein I871_02260 [Borrelia miyamotoi LB-2001]...
1292392Borrelia miyamotoi FR64b1 (0.46%)3E-301-1281-12813685128gb|AHH04980.1|Hypothetical protein BOM_0437 [Borrelia miyamotoi FR64b]
518637Eubacterium biforme DSM 39891 (0.46%)1E-209-1126-10610434104ref|WP_003863905.1|hypothetical protein [[Eubacterium] biforme] gb|EEC91314.1| ...
742726Barnesiella intestinihominis YIT 118601 (0.46%)1E-312-11113-11814130110ref|WP_008862441.1|TonB-dependent outer membrane receptor [Barnesiella intestin...
293826Alkaliphilus metalliredigens QYMF1 (0.46%)2E-292-12011-13313430126ref|YP_001319085.1|hypothetical protein Amet_1218 [Alkaliphilus metalliredigens...
158190Sphaerochaeta pleomorpha str. Grapes1 (0.46%)2E-286-12911-13413130124ref|YP_005062818.1|ATPase component of Mn/Zn ABC-type transporter [Sphaerochaet...






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