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Features and Secondary Structure
	1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 .
	MSFKKIAEMMRQAERETKKKTLAFEQQAFEYNYKNGAIKITILGDLTLKSINIDPVLIDASDKVILEEMIIEATNEAVSDVKTKYDNLVEKTMPKVPGLF
tmhmm (0)	----------------------------------------------------------------------------------------------------
low complexity (0%)	----------------------------------------------------------------------------------------------------
coiled-coils (21%)	----------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXX---------
disordered (44%)	XXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------XXXXXXXXXXXXXXXX-------
psipred	--HHHHHHHHHHHHHHHHHHHHHHH--EEEEEE---EEEEEEE---EEEEEEE-HHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------

# SignalP-4.0 gram+ predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    61	    0.140
  max. Y    16	    0.149
  max. S     8	    0.292
  mean S     1-15   0.202
       D     1-15   0.170    0.450  NO
Name=tmp_signalp_seq	SP='NO' D=0.170 D-cutoff=0.450 Networks=SignalP-TM

Domain Repeats Prediction
Boundary	STD (+/-)	Consensus
--	--	--

Ginzu Domain Prediction 1
Domain	Span	Source	Reference Parent	Parent Span	Confidence	Annotations
	1-100	alignment	3f42A_201	1-93	0.8533	structural genomics, unknown function

PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA
TaxID	Species	Alignments	PSI-Blast Data (alignment with lowest E value)
			E value	Query Span	Sbjct Span	Bit Score	Identity	HSP Length	Accession	Description
1006581	Mycoplasma gallisepticum S6	1 (0.04%)	8E-15	1-99	1-100	86	38	101	ref|NP_853382.2|	hypothetical protein MGA_0400 [Mycoplasma gallisepticum str....
708616	Mycoplasma gallisepticum str. F	1 (0.04%)	2E-14	1-99	1-100	84	38	101	ref|YP_005880915.1|	hypothetical protein MGF_4766 [Mycoplasma gallisepticum str....
887929	Pseudoramibacter alactolyticus ATCC 23263	1 (0.04%)	3E-19	22-99	36-118	100	35	83	ref|WP_006599420.1|	hypothetical protein [Pseudoramibacter alactolyticus] gb|EFV...
550773	Ureaplasma urealyticum serovar 9 str. ATCC 33175	1 (0.04%)	2E-5	1-66	1-65	55	35	66	ref|WP_004026734.1|	hypothetical protein [Ureaplasma urealyticum] gb|EDX54081.1|...
626096	Ureaplasma urealyticum serovar 2 str. ATCC 27814	1 (0.04%)	3E-14	1-100	1-99	84	33	100	ref|YP_002284513.1|	hypothetical protein UUR10_0100 [Ureaplasma urealyticum sero...
519851	Ureaplasma parvum serovar 6 str. ATCC 27818	1 (0.04%)	6E-14	1-100	1-99	83	33	100	ref|WP_006688546.1|	hypothetical protein [Ureaplasma parvum] gb|EDT48740.1| cons...
747682	Mycoplasma alligatoris A21JP2	1 (0.04%)	2E-12	4-95	3-92	78	33	92	ref|WP_005683915.1|	hypothetical protein [Mycoplasma alligatoris] gb|EFF41286.1|...
512564	Mycoplasma crocodyli MP145	1 (0.04%)	4E-12	4-97	1-92	77	33	94	ref|YP_003560333.1|	hypothetical protein MCRO_0734 [Mycoplasma crocodyli MP145] ...
1158602	Enterococcus raffinosus ATCC 49464	1 (0.04%)	2E-18	19-99	24-104	98	32	81	ref|WP_010745626.1|	YbaB/EbfC family DNA-binding protein [Enterococcus raffinosu...
1259825	Enterococcus casseliflavus 14-MB-W-14	1 (0.04%)	3E-15	24-99	29-104	87	32	76	ref|YP_007753182.1|	YbaB/EbfC family DNA-binding protein [Enterococcus casselifl...
1260358	Enterococcus faecalis 06-MB-DW-09	1 (0.04%)	3E-15	24-99	29-104	87	32	76	ref|WP_005236633.1|	hypothetical protein [Enterococcus] gb|EGC68755.1| DNA-bindi...
166587	uncultured Chloroflexi bacterium	1 (0.04%)	8E-19	19-100	43-126	99	31	84	dbj|BAL58008.1|	hypothetical conserved protein [uncultured Chloroflexi bacte...
903814	Eubacterium limosum KIST612	1 (0.04%)	6E-27	2-100	18-116	125	30	99	ref|YP_003958772.1|	hypothetical protein [Eubacterium limosum KIST612] ref|WP_01...
97138	Clostridium sp. ASF356	1 (0.04%)	1E-19	8-93	18-103	101	30	86	ref|WP_004037982.1|	YbaB/EbfC family DNA-binding protein [Clostridium sp. ASF356...
266117	Rubrobacter xylanophilus DSM 9941	1 (0.04%)	4E-14	22-88	26-92	83	30	67	ref|YP_643295.1|	hypothetical protein Rxyl_0509 [Rubrobacter xylanophilus DSM...
374933	Haemophilus influenzae PittII	1 (0.04%)	1E-24	9-88	13-91	118	29	80	ref|WP_005666514.1|	hypothetical protein [Haemophilus influenzae] gb|EDK12151.1|...
1028802	Haemophilus haemolyticus M19107	1 (0.04%)	8E-22	9-88	13-91	108	29	80	ref|WP_005626529.1|	hypothetical protein [Haemophilus haemolyticus] gb|EGT81087....
374927	Haemophilus influenzae 22.1-21	1 (0.04%)	3E-21	9-88	13-91	107	29	80	ref|WP_005649309.1|	hypothetical protein [Haemophilus influenzae] gb|EDJ88968.1|...
1033740	Kurthia sp. JC8E	1 (0.04%)	2E-19	19-99	22-104	101	29	83	ref|WP_010309239.1|	hypothetical protein [Kurthia sp. JC8E]
281689	Desulfuromonas acetoxidans DSM 684	1 (0.04%)	3E-19	19-100	21-104	100	29	84	ref|WP_005997469.1|	hypothetical protein [Desulfuromonas acetoxidans] gb|EAT1723...