Features and Secondary Structure |
| 1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . |
| MGQKVNSNGLRFGINKNWISRWTASSNQQTATWLVQDEKIRNLFFINYRNAQVSNVEIERTQTTVDVYVYAAQPALLIGSENKNIQKITKMIQIIVGRKIKLDLTINEIGSPMLSSRIIARDIANAIENRVPLRSAMRQALTKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLSTLRADIDYAFEKAKTTYGIIGVKVWINRGMIYAKGLNRTPAHILHPQKKQLKTPTIKKTNSVIAKQKLTGSDIETASLKALTDNNQNHE |
tmhmm (0) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
low complexity (0%) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
coiled-coils (0%) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
disordered (22%) | XX----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
psipred | ---------EE---------EEE---HHHHHHHHHHHHHHHHHHHHH------EEEEEEE-HHHHHHHHHHH--HHH------HHHHHHHHHHHH-----EEEEEEEEEE---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----EEEEEE----------EEEEE-------------EEEEEEEEE---EEEEEEEEEE-------------------------------------------------------------- |
PSI-BLAST Sequence Hits (Top 20 by Identity) ALL DATA
|
TaxID |
Species |
Alignments |
PSI-Blast Data (alignment with lowest E value) |
E value |
Query Span |
Sbjct Span |
Bit Score |
Identity |
HSP Length |
Accession |
Description |
414073 | Codium sp. DB2006 | 1 (0.03%) | 2E-4 | 176-206 | 1-31 | 53 | 58 | 31 | gb|ABL11104.1| | ribosomal protein S3 [Codium sp. DB2006] |
414146 | Codium taylorii | 1 (0.03%) | 1E-10 | 166-206 | 1-41 | 73 | 56 | 41 | gb|ABL11072.1| | ribosomal protein S3 [Codium taylorii] gb|ABL11074.1| riboso... |
414078 | Codium sp. DML30929 | 1 (0.03%) | 2E-10 | 166-206 | 1-41 | 73 | 56 | 41 | gb|ABL11040.1| | ribosomal protein S3 [Codium ovale] gb|ABL11050.1| ribosomal... |
414087 | Codium sp. HV1068 | 1 (0.03%) | 3E-10 | 166-206 | 1-41 | 72 | 56 | 41 | gb|ABL11046.1| | ribosomal protein S3 [Codium platylobium] gb|ABL11100.1| rib... |
414121 | Codium bursa | 1 (0.03%) | 3E-10 | 166-206 | 1-41 | 72 | 56 | 41 | gb|ABL10916.1| | ribosomal protein S3 [Codium bursa] gb|ABL10918.1| ribosomal... |
414131 | Codium geppiorum | 2 (0.06%) | 3E-10 | 166-206 | 1-41 | 72 | 56 | 41 | gb|ABL10990.1| | ribosomal protein S3 [Codium geppiorum] |
414071 | Codium cf. minus DHO2-188 | 1 (0.03%) | 8E-10 | 166-206 | 1-41 | 71 | 56 | 41 | gb|ABL11034.1| | ribosomal protein S3 [Codium cf. minus DHO-015] gb|ABL11036.... |
414076 | Codium sp. DHO2-196 | 1 (0.03%) | 4E-10 | 166-206 | 1-41 | 71 | 56 | 41 | gb|ABL10986.1| | ribosomal protein S3 [Codium geppiorum] gb|ABL11006.1| ribos... |
414058 | Codium cf. latum ASH-018 | 1 (0.03%) | 1E-9 | 166-206 | 1-41 | 70 | 56 | 41 | gb|ABL10962.1| | ribosomal protein S3 [Codium cf. flabellatum DHO-009] gb|ABL... |
414080 | Codium sp. DML40218 | 1 (0.03%) | 1E-9 | 166-206 | 1-41 | 70 | 56 | 41 | gb|ABL11092.1| | ribosomal protein S3 [Codium sp. DML40218] |
414137 | Codium muelleri | 1 (0.03%) | 2E-9 | 166-206 | 1-41 | 70 | 56 | 41 | gb|ABL11038.1| | ribosomal protein S3 [Codium muelleri] |
414072 | Codium cf. tenue HV608 | 1 (0.03%) | 1E-9 | 166-206 | 1-41 | 70 | 56 | 41 | gb|ABL11080.1| | ribosomal protein S3 [Codium cf. tenue HV608] |
414077 | Codium sp. DHO2-348 | 1 (0.03%) | 1E-8 | 166-206 | 1-41 | 67 | 56 | 41 | gb|ABL11106.1| | ribosomal protein S3 [Codium sp. DHO2-348] |
414053 | Codium cf. bursa DHO2-176 | 1 (0.03%) | 2E-8 | 166-206 | 1-41 | 66 | 56 | 41 | gb|ABL10920.1| | ribosomal protein S3 [Codium cf. bursa DHO2-176] |
414140 | Codium platyclados | 1 (0.03%) | 5E-10 | 166-206 | 1-41 | 71 | 54 | 41 | gb|ABL11044.1| | ribosomal protein S3 [Codium platyclados] |
414057 | Codium cf. fragile AU5 | 1 (0.03%) | 8E-10 | 166-206 | 1-41 | 71 | 54 | 41 | gb|ABL10976.1| | ribosomal protein S3 [Codium cf. fragile AU5] |
414081 | Codium sp. DML40227 | 1 (0.03%) | 1E-9 | 166-206 | 1-41 | 70 | 54 | 41 | gb|ABL11088.1| | ribosomal protein S3 [Codium sp. DML40227] |
414132 | Codium gracile | 1 (0.03%) | 2E-9 | 166-206 | 1-41 | 70 | 54 | 41 | gb|ABL10992.1| | ribosomal protein S3 [Codium gracile] |
221043 | Codium dimorphum | 1 (0.03%) | 6E-9 | 166-206 | 1-41 | 68 | 54 | 41 | gb|ABL10944.1| | ribosomal protein S3 [Codium dimorphum] |
221051 | Codium spongiosum | 1 (0.03%) | 7E-9 | 166-206 | 1-41 | 68 | 54 | 41 | gb|ABL11064.1| | ribosomal protein S3 [Codium spongiosum] |